Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrimidine utilization protein c | CI641_021075 | Not Available | Negative | 4387299 - 4387685 | 13763.6 |
| peroxyureidoacrylate/ureidoacrylate amidohydrolase rutb | CI641_021080 | Not Available | Negative | 4387697 - 4388389 | 25211.0 |
| pyrimidine utilization protein a | CI641_021085 | Not Available | Negative | 4388389 - 4389480 | 39917.4 |
| hypothetical protein | CI641_021090 | Not Available | Positive | 4389410 - 4389589 | 6457.93 |
| hth-type transcriptional regulator rutr | CI641_021095 | Not Available | Positive | 4389768 - 4390406 | 23716.0 |
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | CI641_021100 | Not Available | Negative | 4390446 - 4394408 | 143805.0 |
| hypothetical protein | CI641_021105 | Not Available | Positive | 4394463 - 4394672 | 7779.91 |
| sodium/proline symporter putp | CI641_021110 | Not Available | Positive | 4394831 - 4396339 | 54347.3 |
| ftr1 family protein | CI641_021115 | Not Available | Positive | 4397005 - 4397835 | 30345.7 |
| iron uptake system protein efeo | CI641_021120 | Not Available | Positive | 4397893 - 4399020 | 41143.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





