Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-protein kinase | CI641_020925 | Not Available | Negative | 4358566 - 4360746 | 81246.5 |
| protein-tyrosine-phosphatase etp | CI641_020930 | Not Available | Negative | 4360766 - 4361212 | 16386.9 |
| polysaccharide export protein | CI641_020935 | Not Available | Negative | 4361200 - 4362339 | 41743.2 |
| yjbh domain-containing protein | CI641_020940 | Not Available | Negative | 4362385 - 4364481 | 78675.2 |
| hypothetical protein | CI641_020945 | Not Available | Negative | 4364481 - 4365227 | 27279.6 |
| yjbf family lipoprotein | CI641_020950 | Not Available | Negative | 4365224 - 4365868 | 24293.0 |
| threonine-rich inner membrane protein gfca | CI641_020955 | Not Available | Negative | 4365975 - 4366280 | 9447.98 |
| cold shock-like protein csph | CI641_020960 | Not Available | Negative | 4366722 - 4366934 | 7720.48 |
| cold shock protein cspg | CI641_020965 | Not Available | Positive | 4367220 - 4367432 | 7781.14 |
| cold-shock protein | CI641_020970 | Not Available | Positive | 4367443 - 4367631 | 7104.55 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





