Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 1 small subunit | CI641_020875 | Not Available | Positive | 4348675 - 4349793 | 40683.6 |
| ni/fe-hydrogenase large subunit | CI641_020880 | Not Available | Positive | 4349790 - 4351583 | 66257.0 |
| ni/fe-hydrogenase b-type cytochrome subunit | CI641_020885 | Not Available | Positive | 4351602 - 4352309 | 27628.9 |
| hydrogenase 1 maturation protease | CI641_020890 | Not Available | Positive | 4352306 - 4352893 | 21547.7 |
| hydrogenase-1 operon protein hyae | CI641_020895 | Not Available | Positive | 4352890 - 4353288 | 14890.6 |
| hydrogenase expression/formation protein | CI641_020900 | Not Available | Positive | 4353285 - 4354142 | 31472.6 |
| cytochrome bd-ii oxidase subunit 1 | CI641_020905 | Not Available | Positive | 4354276 - 4355820 | 57996.3 |
| cytochrome d ubiquinol oxidase subunit ii | CI641_020910 | Not Available | Positive | 4355832 - 4356968 | 42370.2 |
| cytochrome bd-ii oxidase subunit cbdx | CI641_020915 | Not Available | Positive | 4356981 - 4357073 | 3611.71 |
| appa family phytase/histidine-type acid phosphatase | CI641_020920 | Not Available | Positive | 4357153 - 4358451 | 47120.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





