Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna helicase iv | CI641_020825 | Not Available | Positive | 4341007 - 4343061 | 77966.5 |
| methylglyoxal synthase | CI641_020830 | Not Available | Negative | 4343093 - 4343551 | 16919.6 |
| duf2057 family protein | CI641_020835 | Not Available | Negative | 4343647 - 4344309 | 24552.5 |
| coa-binding protein | CI641_020840 | Not Available | Positive | 4344482 - 4344895 | 14702.0 |
| heat shock protein hspq | CI641_020845 | Not Available | Negative | 4344940 - 4345257 | 11779.9 |
| 23s rrna (cytosine(1962)-c(5))-methyltransferase rlmi | CI641_020850 | Not Available | Negative | 4345315 - 4346505 | 44359.5 |
| acylphosphatase | CI641_020855 | Not Available | Positive | 4346600 - 4346878 | 10252.3 |
| sulfurtransferase tuse | CI641_020860 | Not Available | Negative | 4346875 - 4347204 | 12411.0 |
| ftsh protease modulator ycca | CI641_020865 | Not Available | Negative | 4347295 - 4347954 | 23364.3 |
| Trna-ser | Not Available | Not Available | Positive | 4348161 - 4348248 | Not Available |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





