Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane integrity-associated transporter subunit pqic | CI641_020775 | Not Available | Positive | 4331421 - 4331984 | 20635.6 |
| ribosome modulation factor | CI641_020780 | Not Available | Positive | 4332240 - 4332407 | 6507.88 |
| bifunctional 3-hydroxydecanoyl-acp dehydratase/trans-2-decenoyl-acp isomerase | CI641_020785 | Not Available | Negative | 4332477 - 4332995 | 18970.2 |
| lon protease family protein | CI641_020790 | Not Available | Negative | 4333064 - 4334824 | 65808.3 |
| macrodomain ter protein matp | CI641_020795 | Not Available | Positive | 4335010 - 4335462 | 17703.4 |
| porin ompa | CI641_020800 | Not Available | Negative | 4335537 - 4336589 | 37439.1 |
| cell division inhibitor sula | CI641_020805 | Not Available | Negative | 4336946 - 4337455 | 18802.5 |
| crp-s regulon transcriptional coactivator sxy | CI641_020810 | Not Available | Positive | 4337674 - 4338303 | 24148.3 |
| tigr01666 family membrane protein | CI641_020815 | Not Available | Negative | 4338266 - 4340428 | 82036.8 |
| yccf domain-containing protein | CI641_020820 | Not Available | Negative | 4340438 - 4340884 | 16276.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





