Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | CI641_020725 | Not Available | Positive | 4319414 - 4319956 | 18914.7 |
| type 1 fimbrial protein | CI641_020730 | Not Available | Positive | 4319964 - 4320479 | 18443.9 |
| fimbrial chaperone | CI641_020735 | Not Available | Positive | 4320472 - 4321182 | 25868.3 |
| quinone-dependent dihydroorotate dehydrogenase | CI641_020740 | Not Available | Positive | 4321293 - 4322303 | 36776.8 |
| cell division protein zapc | CI641_020745 | Not Available | Positive | 4322477 - 4323019 | 20589.9 |
| 6-n-hydroxylaminopurine resistance protein ycbx | CI641_020750 | Not Available | Negative | 4323016 - 4324125 | 40662.6 |
| bifunctional 23s rrna (guanine(2069)-n(7))-methyltransferase rlmk/23s rrna (guanine(2445)-n(2))-methyltransferase rlml | CI641_020755 | Not Available | Positive | 4324369 - 4326477 | 78930.6 |
| abc transporter atp-binding protein | CI641_020760 | Not Available | Positive | 4326489 - 4328396 | 72072.1 |
| membrane integrity-associated transporter subunit pqia | CI641_020765 | Not Available | Positive | 4328526 - 4329779 | 46466.2 |
| intermembrane transport protein pqib | CI641_020770 | Not Available | Positive | 4329784 - 4331424 | 60524.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





