Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosome partition protein mukf | CI641_020625 | Not Available | Positive | 4290678 - 4292000 | 50581.7 |
| chromosome partition protein muke | CI641_020630 | Not Available | Positive | 4291981 - 4292685 | 26976.1 |
| chromosome partition protein mukb | CI641_020635 | Not Available | Positive | 4292685 - 4297145 | 170211.0 |
| l,d-transpeptidase | CI641_020640 | Not Available | Positive | 4297406 - 4299253 | 67828.3 |
| duf882 domain-containing protein | CI641_020645 | Not Available | Positive | 4299434 - 4299982 | 20355.6 |
| hydroxyacylglutathione hydrolase gloc | CI641_020650 | Not Available | Positive | 4300009 - 4300656 | 23773.4 |
| aspartate/tyrosine/aromatic aminotransferase | CI641_020655 | Not Available | Negative | 4300878 - 4302068 | 43575.7 |
| porin ompf | CI641_020660 | Not Available | Negative | 4302253 - 4303341 | 39335.4 |
| asparagine--trna ligase | CI641_020665 | Not Available | Negative | 4303943 - 4305343 | 52573.2 |
| nicotinate phosphoribosyltransferase | CI641_020670 | Not Available | Negative | 4305512 - 4306714 | 45913.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





