Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2593 family protein | CI641_020085 | Not Available | Positive | 4180683 - 4181171 | 18420.0 |
| 23s rrna (uracil(747)-c(5))-methyltransferase rlmc | CI641_020090 | Not Available | Positive | 4181212 - 4182339 | 41990.1 |
| arginine abc transporter substrate-binding protein | CI641_020095 | Not Available | Negative | 4182514 - 4183245 | 26857.9 |
| arginine abc transporter permease artm | CI641_020100 | Not Available | Negative | 4183471 - 4184139 | 24915.3 |
| arginine abc transporter permease artq | CI641_020105 | Not Available | Negative | 4184139 - 4184855 | 26218.7 |
| arginine abc transporter substrate-binding protein | CI641_020110 | Not Available | Negative | 4184862 - 4185593 | 26931.0 |
| arginine abc transporter atp-binding protein artp | CI641_020115 | Not Available | Negative | 4185611 - 4186339 | 27023.7 |
| lipoprotein | CI641_020120 | Not Available | Negative | 4186557 - 4187072 | 19055.5 |
| heavy metal-binding domain-containing protein | CI641_020125 | Not Available | Positive | 4187198 - 4187521 | 11437.7 |
| n-acetylmuramoyl-l-alanine amidase | CI641_020130 | Not Available | Positive | 4187518 - 4188348 | 31026.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





