Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase family protein | CI641_019985 | Not Available | Negative | 4162548 - 4163174 | 23714.4 |
| serine-type d-ala-d-ala carboxypeptidase | CI641_019990 | Not Available | Positive | 4163420 - 4164622 | 43643.4 |
| dna-binding transcriptional repressor deor | CI641_019995 | Not Available | Negative | 4164669 - 4165427 | 28576.6 |
| undecaprenyl-diphosphate phosphatase | CI641_020000 | Not Available | Negative | 4165485 - 4166081 | 22419.9 |
| multidrug efflux mfs transporter mdfa | CI641_020005 | Not Available | Positive | 4166366 - 4167598 | 44291.7 |
| hypothetical protein | CI641_020010 | Not Available | Negative | 4167639 - 4167923 | 10005.2 |
| 5-amino-6-(5-phospho-d-ribitylamino)uracil phosphatase | CI641_020015 | Not Available | Negative | 4168009 - 4168824 | 30265.0 |
| mfs transporter | CI641_020020 | Not Available | Negative | 4168824 - 4170032 | 41855.1 |
| tetr/acrr family transcriptional regulator | CI641_020025 | Not Available | Positive | 4170116 - 4170652 | 20339.6 |
| transporter | CI641_020030 | Not Available | Negative | 4170827 - 4172512 | 60355.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





