Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-aspartyl-peptidase | CI641_019935 | Not Available | Positive | 4149262 - 4150227 | 33406.0 |
| glutathione abc transporter atp-binding protein gsia | CI641_019940 | Not Available | Positive | 4150214 - 4152085 | 69095.3 |
| glutathione abc transporter substrate-binding protein gsib | CI641_019945 | Not Available | Positive | 4152105 - 4153643 | 56432.1 |
| glutathione abc transporter permease gsic | CI641_019950 | Not Available | Positive | 4153661 - 4154581 | 34068.5 |
| glutathione abc transporter permease gsid | CI641_019955 | Not Available | Positive | 4154584 - 4155495 | 33254.3 |
| eal domain-containing protein | CI641_019960 | Not Available | Positive | 4155673 - 4158021 | 90048.7 |
| diguanylate cyclase | CI641_019965 | Not Available | Positive | 4158029 - 4159357 | 49875.8 |
| 30s ribosomal protein s12 methylthiotransferase rimo | CI641_019970 | Not Available | Negative | 4159404 - 4160729 | 49584.6 |
| biofilm formation regulator bssr | CI641_019975 | Not Available | Positive | 4160942 - 4161325 | 14536.6 |
| pqq-dependent sugar dehydrogenase | CI641_019980 | Not Available | Positive | 4161436 - 4162551 | 41112.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





