Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 31 protein | CI641_019885 | Not Available | Negative | 4135451 - 4137814 | 90869.9 |
| mfs transporter | CI641_019890 | Not Available | Negative | 4137829 - 4139130 | 47422.8 |
| laci family transcriptional regulator | CI641_019895 | Not Available | Positive | 4139425 - 4140528 | 40773.4 |
| duf1479 domain-containing protein | CI641_019900 | Not Available | Negative | 4140495 - 4141760 | 47301.8 |
| sugar-phosphatase ybiv | CI641_019905 | Not Available | Negative | 4141907 - 4142722 | 30427.6 |
| glycyl radical protein | CI641_019910 | Not Available | Negative | 4142868 - 4145300 | 90086.5 |
| glycyl-radical enzyme activating protein | CI641_019915 | Not Available | Negative | 4145306 - 4146205 | 33040.0 |
| fructose-6-phosphate aldolase | CI641_019920 | Not Available | Positive | 4146336 - 4146998 | 23040.3 |
| molybdopterin-synthase adenylyltransferase moeb | CI641_019925 | Not Available | Negative | 4147074 - 4147823 | 26736.5 |
| molybdopterin molybdotransferase moea | CI641_019930 | Not Available | Negative | 4147823 - 4149058 | 44140.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





