Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1471 domain-containing protein | CI641_019785 | Not Available | Negative | 4115523 - 4115783 | 8568.2 |
| c4-type zinc finger protein ybii | CI641_019790 | Not Available | Negative | 4116048 - 4116314 | 9756.33 |
| pkhd-type hydroxylase ybix | CI641_019795 | Not Available | Negative | 4116388 - 4117065 | 25530.2 |
| catecholate siderophore receptor fiu | CI641_019800 | Not Available | Negative | 4117107 - 4119389 | 81958.5 |
| duf1471 domain-containing protein | CI641_019805 | Not Available | Negative | 4119654 - 4119914 | 8896.65 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | CI641_019810 | Not Available | Positive | 4120085 - 4121116 | 38353.9 |
| mechanosensitive channel protein | CI641_019815 | Not Available | Negative | 4121113 - 4123338 | 81878.4 |
| glutamine abc transporter atp-binding protein glnq | CI641_019820 | Not Available | Negative | 4123455 - 4124177 | 26733.6 |
| glutamine abc transporter permease glnp | CI641_019825 | Not Available | Negative | 4124174 - 4124833 | 24365.8 |
| glutamine abc transporter substrate-binding protein glnh | CI641_019830 | Not Available | Negative | 4124972 - 4125718 | 27191.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





