Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative acyl-coa thioester hydrolase | CI641_019635 | Not Available | Negative | 4083856 - 4085139 | 46023.6 |
| kinase inhibitor | CI641_019640 | Not Available | Negative | 4085291 - 4085767 | 17072.0 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | CI641_019645 | Not Available | Negative | 4085826 - 4087115 | 47402.4 |
| biotin synthase | CI641_019650 | Not Available | Positive | 4087202 - 4088242 | 38650.3 |
| 8-amino-7-oxononanoate synthase | CI641_019655 | Not Available | Positive | 4088239 - 4089393 | 41640.8 |
| malonyl-acp o-methyltransferase bioc | CI641_019660 | Not Available | Positive | 4089380 - 4090135 | 28277.8 |
| atp-dependent dethiobiotin synthetase biod | CI641_019665 | Not Available | Positive | 4090128 - 4090805 | 24121.9 |
| excinuclease abc subunit b | CI641_019670 | Not Available | Positive | 4091384 - 4093405 | 76230.6 |
| uridine diphosphate-n-acetylglucosamine-binding protein yvck | CI641_019675 | Not Available | Negative | 4093597 - 4094505 | 32790.0 |
| gtp 3',8-cyclase moaa | CI641_019680 | Not Available | Positive | 4094902 - 4095891 | 37306.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





