Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome ubiquinol oxidase subunit i | CI641_019430 | Not Available | Positive | 4049440 - 4051008 | 58208.4 |
| cytochrome d ubiquinol oxidase subunit ii | CI641_019435 | Not Available | Positive | 4051024 - 4052163 | 42455.6 |
| cytochrome bd-i oxidase subunit cydx | CI641_019440 | Not Available | Positive | 4052178 - 4052291 | 4041.9 |
| cyd operon protein ybge | CI641_019445 | Not Available | Positive | 4052291 - 4052584 | 10933.0 |
| tol-pal system-associated acyl-coa thioesterase | CI641_019450 | Not Available | Positive | 4052734 - 4053138 | 15562.9 |
| tol-pal system protein tolq | CI641_019455 | Not Available | Positive | 4053135 - 4053827 | 25599.2 |
| colicin uptake protein tolr | CI641_019460 | Not Available | Positive | 4053831 - 4054259 | 15383.9 |
| cell envelope integrity protein tola | CI641_019465 | Not Available | Positive | 4054324 - 4055589 | 43158.6 |
| tol-pal system protein tolb | CI641_019470 | Not Available | Positive | 4055722 - 4057014 | 45958.1 |
| peptidoglycan-associated lipoprotein pal | CI641_019475 | Not Available | Positive | 4057049 - 4057570 | 18825.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





