Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-oxoprolinase subunit pxpa | CI641_019330 | Not Available | Positive | 4023420 - 4024154 | 25917.9 |
| endonuclease viii | CI641_019335 | Not Available | Positive | 4024190 - 4024981 | 29850.8 |
| abrb family transcriptional regulator | CI641_019340 | Not Available | Negative | 4024978 - 4026024 | 36839.0 |
| fimbrial protein | CI641_019345 | Not Available | Negative | 4026176 - 4027237 | 39542.6 |
| molecular chaperone | CI641_019350 | Not Available | Negative | 4027234 - 4027965 | 27229.9 |
| fimbrial biogenesis outer membrane usher protein | CI641_019355 | Not Available | Negative | 4027980 - 4030430 | 90240.5 |
| type 1 fimbrial protein | CI641_019360 | Not Available | Negative | 4030490 - 4031056 | 19855.1 |
| citrate (si)-synthase | CI641_019365 | Not Available | Negative | 4031447 - 4032730 | 48017.7 |
| hypothetical protein | CI641_019370 | Not Available | Negative | 4032936 - 4033043 | 3827.66 |
| succinate dehydrogenase cytochrome b556 subunit | CI641_019375 | Not Available | Positive | 4033439 - 4033828 | 14300.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





