Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CI641_019275 | Not Available | Positive | 4015563 - 4015949 | 13021.7 |
| hypothetical protein | CI641_019285 | Not Available | Positive | 4016206 - 4016535 | 11934.2 |
| hypothetical protein | CI641_019290 | Not Available | Positive | 4016577 - 4016858 | 10978.9 |
| type i toxin-antitoxin system syme family toxin | CI641_019295 | Not Available | Negative | 4016906 - 4017235 | 12429.8 |
| duf1722 domain-containing protein | CI641_019300 | Not Available | Positive | 4017364 - 4017873 | 20299.4 |
| deoxyribodipyrimidine photo-lyase | CI641_019305 | Not Available | Positive | 4017870 - 4019288 | 53817.1 |
| dipeptide permease dtpd | CI641_019310 | Not Available | Negative | 4019330 - 4020811 | 54148.1 |
| nif3-like dinuclear metal center hexameric protein | CI641_019315 | Not Available | Positive | 4021082 - 4021825 | 26894.0 |
| 5-oxoprolinase subunit pxpb | CI641_019320 | Not Available | Positive | 4021848 - 4022504 | 23948.0 |
| 5-oxoprolinase subunit pxpc | CI641_019325 | Not Available | Positive | 4022498 - 4023430 | 34444.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





