Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| k(+)-transporting atpase subunit c | CI641_019215 | Not Available | Negative | 4002529 - 4003101 | 20351.4 |
| potassium-transporting atpase subunit kdpb | CI641_019220 | Not Available | Negative | 4003110 - 4005158 | 72226.5 |
| potassium-transporting atpase subunit kdpa | CI641_019225 | Not Available | Negative | 4005181 - 4006854 | 59173.7 |
| k(+)-transporting atpase subunit f | CI641_019230 | Not Available | Negative | 4006854 - 4006943 | 3071.95 |
| duf2517 family protein | CI641_019235 | Not Available | Positive | 4007256 - 4007462 | 8275.0 |
| isas1-like element isec1 family transposase | CI641_019240 | Not Available | Positive | 4008162 - 4009298 | 43130.9 |
| hypothetical protein | CI641_019250 | Not Available | Positive | 4009867 - 4010244 | 14312.0 |
| type i toxin-antitoxin system syme family toxin | CI641_019255 | Not Available | Negative | 4010309 - 4010602 | 10899.3 |
| helix-turn-helix transcriptional regulator | CI641_019260 | Not Available | Negative | 4010677 - 4011075 | 15343.1 |
| toprim domain-containing protein | CI641_019265 | Not Available | Positive | 4011173 - 4013905 | 98850.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





