Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lexa regulated protein | CI641_019165 | Not Available | Negative | 3991325 - 3991618 | 11280.7 |
| esterase | CI641_019170 | Not Available | Negative | 3991758 - 3992522 | 28448.9 |
| replication initiation negative regulator seqa | CI641_019175 | Not Available | Positive | 3992707 - 3993252 | 20316.6 |
| alpha-d-glucose phosphate-specific phosphoglucomutase | CI641_019180 | Not Available | Positive | 3993278 - 3994918 | 58364.2 |
| putrescine-ornithine antiporter | CI641_019185 | Not Available | Negative | 3994974 - 3996293 | 46497.6 |
| ornithine decarboxylase spef | CI641_019190 | Not Available | Negative | 3996290 - 3998488 | 82559.4 |
| duf2618 domain-containing protein | CI641_019195 | Not Available | Negative | 3998799 - 3998903 | 4288.17 |
| tonb-dependent receptor | CI641_019200 | Not Available | Negative | 3998882 - 3999016 | 5267.43 |
| two-component system response regulator kdpe | CI641_019205 | Not Available | Negative | 3999178 - 3999855 | 25317.6 |
| two-component system sensor histidine kinase kdbd | CI641_019210 | Not Available | Negative | 3999852 - 4002536 | 98747.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





