Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator nagc | CI641_019115 | Not Available | Negative | 3980225 - 3981445 | 44544.0 |
| n-acetylglucosamine-6-phosphate deacetylase | CI641_019120 | Not Available | Negative | 3981454 - 3982602 | 40979.5 |
| glucosamine-6-phosphate deaminase | CI641_019125 | Not Available | Negative | 3982662 - 3983462 | 29775.9 |
| pts n-acetyl glucosamine transporter subunit iiabc | CI641_019130 | Not Available | Positive | 3983795 - 3985741 | 68335.9 |
| glutamine--trna ligase | CI641_019135 | Not Available | Positive | 3985944 - 3987608 | 63481.3 |
| chitoporin | CI641_019140 | Not Available | Positive | 3988054 - 3989460 | 52748.8 |
| hypothetical protein | CI641_019145 | Not Available | Positive | 3989510 - 3989836 | 12017.3 |
| ferric iron uptake transcriptional regulator | CI641_019150 | Not Available | Negative | 3989920 - 3990366 | 16795.8 |
| fur leader peptide | CI641_019155 | Not Available | Negative | 3990359 - 3990445 | 3108.72 |
| flavodoxin flda | CI641_019160 | Not Available | Negative | 3990655 - 3991185 | 19737.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





