Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome silencing factor | CI641_018915 | Not Available | Negative | 3947551 - 3947868 | 11582.9 |
| adenosylcobalamin/alpha-ribazole phosphatase | CI641_018920 | Not Available | Negative | 3948128 - 3948739 | 23384.8 |
| nicotinate-nucleotide adenylyltransferase | CI641_018925 | Not Available | Negative | 3948763 - 3949404 | 24529.3 |
| dna polymerase iii subunit delta | CI641_018930 | Not Available | Negative | 3949406 - 3950437 | 38722.0 |
| lps assembly lipoprotein lpte | CI641_018935 | Not Available | Negative | 3950437 - 3951018 | 21357.8 |
| leucine--trna ligase | CI641_018940 | Not Available | Negative | 3951033 - 3953615 | 97240.0 |
| zinc ribbon-containing protein | CI641_018945 | Not Available | Positive | 3953850 - 3954332 | 18798.2 |
| sel1-like repeat protein | CI641_018950 | Not Available | Negative | 3954402 - 3955379 | 37104.8 |
| duf1266 domain-containing protein | CI641_018955 | Not Available | Positive | 3955543 - 3956250 | 27793.6 |
| j domain-containing protein | CI641_018960 | Not Available | Positive | 3956247 - 3957674 | 55265.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





