Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| twin-arginine translocase subunit tate | CI641_018865 | Not Available | Positive | 3937777 - 3937980 | 7024.71 |
| lipoyl synthase | CI641_018870 | Not Available | Negative | 3938081 - 3939046 | 36073.8 |
| dna-binding transcriptional regulator | CI641_018875 | Not Available | Negative | 3939255 - 3940208 | 35950.4 |
| lipoyl(octanoyl) transferase lipb | CI641_018880 | Not Available | Negative | 3940467 - 3941108 | 23884.0 |
| duf493 family protein | CI641_018885 | Not Available | Negative | 3941209 - 3941472 | 9827.92 |
| d-alanyl-d-alanine carboxypeptidase daca | CI641_018890 | Not Available | Negative | 3941583 - 3942794 | 44446.5 |
| endolytic peptidoglycan transglycosylase rlpa | CI641_018895 | Not Available | Negative | 3942934 - 3944022 | 37502.0 |
| peptidoglycan glycosyltransferase mrdb | CI641_018900 | Not Available | Negative | 3944033 - 3945145 | 40478.6 |
| peptidoglycan dd-transpeptidase mrda | CI641_018905 | Not Available | Negative | 3945148 - 3947049 | 70860.6 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | CI641_018910 | Not Available | Negative | 3947080 - 3947547 | 17372.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





