Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate (pro-3s)-lyase subunit beta | CI641_018815 | Not Available | Negative | 3928409 - 3929317 | 33141.6 |
| citrate lyase acyl carrier protein | CI641_018820 | Not Available | Negative | 3929314 - 3929610 | 10689.9 |
| [citrate (pro-3s)-lyase] ligase | CI641_018825 | Not Available | Negative | 3929625 - 3930683 | 40107.5 |
| sensor histidine kinase dpib | CI641_018830 | Not Available | Positive | 3931063 - 3932721 | 61659.7 |
| two-component response regulator dpia | CI641_018835 | Not Available | Positive | 3932690 - 3933370 | 25454.9 |
| anaerobic c4-dicarboxylate transporter dcuc | CI641_018840 | Not Available | Negative | 3933411 - 3934796 | 48415.3 |
| phospholipid:lipid a palmitoyltransferase | CI641_018845 | Not Available | Positive | 3935385 - 3935945 | 21770.6 |
| transcription antiterminator/rna stability regulator cspe | CI641_018850 | Not Available | Positive | 3936120 - 3936329 | 7463.84 |
| fluoride efflux transporter crcb | CI641_018855 | Not Available | Negative | 3936384 - 3936767 | 13766.1 |
| deaminated glutathione amidase | CI641_018860 | Not Available | Positive | 3936860 - 3937648 | 28683.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





