Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | CI641_018715 | Not Available | Positive | 3907453 - 3908199 | 26291.3 |
| proofreading thioesterase enth | CI641_018720 | Not Available | Positive | 3908202 - 3908615 | 14971.0 |
| carbon starvation protein csta | CI641_018725 | Not Available | Positive | 3908796 - 3910901 | 75109.7 |
| ybdd/yjix family protein | CI641_018730 | Not Available | Positive | 3911083 - 3911280 | 7467.89 |
| hydroxycarboxylate dehydrogenase hcxa | CI641_018735 | Not Available | Negative | 3911290 - 3912378 | 39082.7 |
| methionine-oxo-acid transaminase | CI641_018740 | Not Available | Positive | 3912487 - 3913647 | 43021.3 |
| hypothetical protein | CI641_018745 | Not Available | Negative | 3913648 - 3914277 | 23944.8 |
| phosphoadenosine phosphosulfate reductase | CI641_018750 | Not Available | Negative | 3914250 - 3915470 | 47797.1 |
| lysr family transcriptional regulator | CI641_018755 | Not Available | Negative | 3915617 - 3916519 | 34298.8 |
| thiol:disulfide interchange protein dsbg | CI641_018760 | Not Available | Negative | 3916728 - 3917474 | 27469.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





