Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dimethyl sulfoxide reductase subunit a | CI641_000600 | Not Available | Positive | 129241 - 131667 | 89699.9 |
| dimethyl sulfoxide reductase subunit a | CI641_000605 | Not Available | Positive | 131728 - 134151 | 89991.0 |
| dimethylsulfoxide reductase subunit b | CI641_000610 | Not Available | Positive | 134162 - 134779 | 22752.9 |
| dimethyl sulfoxide reductase anchor subunit | CI641_000615 | Not Available | Positive | 134781 - 135635 | 30491.6 |
| tat proofreading chaperone dmsd | CI641_000620 | Not Available | Positive | 135678 - 136292 | 23345.8 |
| voltage-gated clc-type chloride channel clcb | CI641_000625 | Not Available | Positive | 136452 - 137744 | 45690.0 |
| atp-dependent dethiobiotin synthetase biod | CI641_000630 | Not Available | Negative | 137697 - 138392 | 24968.4 |
| dna-binding transcriptional repressor mlc | CI641_000635 | Not Available | Negative | 138517 - 139737 | 44292.7 |
| lysr family transcriptional regulator | CI641_000640 | Not Available | Negative | 139872 - 140765 | 33311.4 |
| mfs transporter | CI641_000645 | Not Available | Positive | 140872 - 142125 | 45260.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





