Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4434 family protein | CI641_018560 | Not Available | Negative | 3867330 - 3868220 | 32959.4 |
| phage receptor | CI641_018565 | Not Available | Negative | 3868221 - 3871193 | 111431.0 |
| phage adsorption protein nrfb | CI641_018570 | Not Available | Negative | 3871180 - 3873417 | 85402.4 |
| cu(+)/ag(+) sensor histidine kinase cuss | CI641_018575 | Not Available | Negative | 3873567 - 3875009 | 53750.2 |
| copper response regulator transcription factor cusr | CI641_018580 | Not Available | Negative | 3874999 - 3875682 | 25396.1 |
| cu(+)/ag(+) efflux rnd transporter outer membrane channel cusc | CI641_018585 | Not Available | Positive | 3875839 - 3877221 | 50743.0 |
| cu(+)/ag(+) efflux rnd transporter periplasmic metallochaperone cusf | CI641_018590 | Not Available | Positive | 3877245 - 3877577 | 12227.8 |
| cu(+)/ag(+) efflux rnd transporter periplasmic adaptor subunit cusb | CI641_018595 | Not Available | Positive | 3877593 - 3878816 | 44443.5 |
| cu(+)/ag(+) efflux rnd transporter permease subunit cusa | CI641_018600 | Not Available | Positive | 3878828 - 3881971 | 114644.0 |
| phenylalanine transporter | CI641_018605 | Not Available | Positive | 3882073 - 3883449 | 50662.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





