Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional repressor allr | CI641_018405 | Not Available | Positive | 3834525 - 3835340 | 29271.4 |
| glyoxylate carboligase | CI641_018410 | Not Available | Positive | 3835430 - 3837211 | 64793.6 |
| hydroxypyruvate isomerase | CI641_018415 | Not Available | Positive | 3837224 - 3838000 | 29370.1 |
| 2-hydroxy-3-oxopropionate reductase | CI641_018420 | Not Available | Positive | 3838100 - 3838978 | 30802.5 |
| putative allantoin permease | CI641_018425 | Not Available | Positive | 3839148 - 3840602 | 52489.2 |
| allantoinase allb | CI641_018430 | Not Available | Positive | 3840662 - 3842023 | 49588.4 |
| uracil/xanthine transporter | CI641_018435 | Not Available | Positive | 3842080 - 3843381 | 47228.2 |
| glycerate 3-kinase | CI641_018440 | Not Available | Positive | 3843403 - 3844548 | 38679.8 |
| (s)-ureidoglycine aminohydrolase | CI641_018445 | Not Available | Negative | 3844776 - 3845561 | 28692.0 |
| allantoate deiminase | CI641_018450 | Not Available | Negative | 3845572 - 3846807 | 45586.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





