Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cys-trna(pro)/cys-trna(cys) deacylase ybak | CI641_018305 | Not Available | Negative | 3814430 - 3814909 | 17093.9 |
| hypothetical protein | CI641_018310 | Not Available | Negative | 3815113 - 3815907 | 29948.3 |
| type ii toxin-antitoxin system rele/pare family toxin | CI641_018315 | Not Available | Positive | 3816040 - 3816342 | 11782.0 |
| higa family addiction module antidote protein | CI641_018320 | Not Available | Positive | 3816378 - 3816719 | 13171.8 |
| copper-exporting p-type atpase copa | CI641_018325 | Not Available | Negative | 3816777 - 3819281 | 87944.5 |
| glutaminase a | CI641_018330 | Not Available | Positive | 3819543 - 3820475 | 33002.4 |
| amino acid permease | CI641_018335 | Not Available | Positive | 3820478 - 3821770 | 45661.5 |
| hth-type transcriptional regulator cuer | CI641_018340 | Not Available | Positive | 3821895 - 3822302 | 15236.0 |
| nfed family protein | CI641_018345 | Not Available | Negative | 3822303 - 3822761 | 16939.8 |
| spfh/band 7/phb domain protein | CI641_018350 | Not Available | Negative | 3822758 - 3823675 | 33745.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





