Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybab/ebfc family nucleoid-associated protein | CI641_018250 | Not Available | Positive | 3801953 - 3802282 | 12015.6 |
| recombination protein recr | CI641_018255 | Not Available | Positive | 3802282 - 3802887 | 21964.3 |
| molecular chaperone htpg | CI641_018260 | Not Available | Positive | 3802997 - 3804871 | 71452.4 |
| adenylate kinase | CI641_018265 | Not Available | Positive | 3805052 - 3805696 | 23587.4 |
| ferrochelatase | CI641_018275 | Not Available | Positive | 3805932 - 3806894 | 35926.4 |
| acetyl esterase | CI641_018280 | Not Available | Negative | 3806891 - 3807850 | 36036.0 |
| inosine/guanosine kinase | CI641_018285 | Not Available | Positive | 3808002 - 3809306 | 48451.4 |
| kef family k(+) transporter | CI641_018290 | Not Available | Negative | 3809389 - 3811065 | 59471.4 |
| mfs transporter | CI641_018295 | Not Available | Negative | 3811303 - 3812523 | 43308.2 |
| bifunctional udp-sugar hydrolase/5'-nucleotidase | CI641_018300 | Not Available | Positive | 3812741 - 3814393 | 60829.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





