Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative selenium delivery protein ydfz | CI641_000550 | Not Available | Positive | 120855 - 121058 | 7276.83 |
| mannitol dehydrogenase family protein | CI641_000555 | Not Available | Negative | 121094 - 122554 | 53637.2 |
| mhs family mfs transporter | CI641_000560 | Not Available | Negative | 122643 - 124010 | 49398.8 |
| zn-dependent oxidoreductase | CI641_000565 | Not Available | Negative | 124068 - 125087 | 36552.1 |
| starvation-sensing protein rspa | CI641_000570 | Not Available | Negative | 125099 - 126313 | 45971.0 |
| ynfa family protein | CI641_000575 | Not Available | Negative | 126519 - 126845 | 11920.2 |
| duf1283 family protein | CI641_000580 | Not Available | Positive | 126980 - 127321 | 12909.3 |
| spermidine n1-acetyltransferase | CI641_000585 | Not Available | Positive | 127356 - 127916 | 21888.2 |
| ynfc family lipoprotein | CI641_000590 | Not Available | Negative | 127919 - 128629 | 26508.3 |
| duf1161 domain-containing protein | CI641_000595 | Not Available | Positive | 128737 - 129042 | 10519.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





