Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | CI641_018100 | Not Available | Positive | 3769781 - 3771652 | 68153.7 |
| hypothetical protein | CI641_018105 | Not Available | Positive | 3771803 - 3772174 | 12716.4 |
| ybgc/fadm family acyl-coa thioesterase | CI641_018110 | Not Available | Positive | 3772280 - 3772678 | 15031.2 |
| 7-cyano-7-deazaguanine synthase quec | CI641_018115 | Not Available | Negative | 3772730 - 3773425 | 25453.5 |
| sgrr family transcriptional regulator | CI641_018120 | Not Available | Negative | 3773490 - 3775190 | 64965.2 |
| hmp-pp phosphatase | CI641_018125 | Not Available | Positive | 3775290 - 3776108 | 30330.6 |
| lrp/asnc family transcriptional regulator | CI641_018130 | Not Available | Positive | 3776261 - 3776719 | 17438.4 |
| smda family multidrug abc transporter permease/atp-binding protein | CI641_018135 | Not Available | Positive | 3776749 - 3778521 | 66075.2 |
| smdb family multidrug efflux abc transporter permease/atp-binding protein | CI641_018140 | Not Available | Positive | 3778514 - 3780295 | 65257.6 |
| p-ii family nitrogen regulator | CI641_018145 | Not Available | Positive | 3780476 - 3780814 | 12259.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





