Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome o ubiquinol oxidase subunit i | CI641_018050 | Not Available | Negative | 3756516 - 3758507 | 74372.2 |
| cytochrome o ubiquinol oxidase subunit ii | CI641_018055 | Not Available | Negative | 3758529 - 3759476 | 34971.2 |
| muropeptide mfs transporter ampg | CI641_018060 | Not Available | Negative | 3759936 - 3761411 | 53306.4 |
| hypothetical protein | CI641_018065 | Not Available | Negative | 3761455 - 3762033 | 20951.3 |
| transcriptional regulator bola | CI641_018070 | Not Available | Positive | 3762338 - 3762655 | 11994.3 |
| trigger factor | CI641_018075 | Not Available | Positive | 3762999 - 3764297 | 48195.4 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | CI641_018080 | Not Available | Positive | 3764543 - 3765166 | 23188.1 |
| atp-dependent clp protease atp-binding subunit clpx | CI641_018085 | Not Available | Positive | 3765292 - 3766566 | 46358.7 |
| lon protease | CI641_018090 | Not Available | Positive | 3766754 - 3769108 | 87443.4 |
| dna-binding protein hu-beta | CI641_018095 | Not Available | Positive | 3769317 - 3769589 | 9226.08 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





