Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (2e,6e)-farnesyl diphosphate synthase | CI641_018000 | Not Available | Negative | 3748068 - 3748967 | 32160.5 |
| exodeoxyribonuclease vii small subunit | CI641_018005 | Not Available | Negative | 3748967 - 3749209 | 8952.42 |
| trna 4-thiouridine(8) synthase thii | CI641_018010 | Not Available | Positive | 3749415 - 3750863 | 55018.4 |
| protein deglycase yajl | CI641_018015 | Not Available | Negative | 3750917 - 3751507 | 20805.3 |
| 2-dehydropantoate 2-reductase | CI641_018020 | Not Available | Negative | 3751470 - 3752381 | 33872.8 |
| yajq family cyclic di-gmp-binding protein | CI641_018025 | Not Available | Positive | 3752549 - 3753040 | 18344.9 |
| mfs transporter | CI641_018030 | Not Available | Negative | 3753168 - 3754532 | 48770.9 |
| protoheme ix farnesyltransferase | CI641_018035 | Not Available | Negative | 3754681 - 3755571 | 32250.4 |
| cytochrome o ubiquinol oxidase subunit iv | CI641_018040 | Not Available | Negative | 3755583 - 3755912 | 12030.2 |
| cytochrome o ubiquinol oxidase subunit iii | CI641_018045 | Not Available | Negative | 3755912 - 3756526 | 22624.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





