Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-specific channel-forming protein tsx | CI641_017950 | Not Available | Negative | 3738995 - 3739879 | 33590.6 |
| duf3251 domain-containing protein | CI641_017955 | Not Available | Negative | 3740178 - 3740717 | 19633.6 |
| transcriptional regulator nrdr | CI641_017960 | Not Available | Positive | 3740868 - 3741317 | 17229.9 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | CI641_017965 | Not Available | Positive | 3741321 - 3742424 | 40345.6 |
| 6,7-dimethyl-8-ribityllumazine synthase | CI641_017970 | Not Available | Positive | 3742513 - 3742983 | 16157.4 |
| transcription antitermination factor nusb | CI641_017975 | Not Available | Positive | 3743003 - 3743422 | 15689.9 |
| thiamine-phosphate kinase | CI641_017980 | Not Available | Positive | 3743500 - 3744477 | 35112.8 |
| phosphatidylglycerophosphatase a | CI641_017985 | Not Available | Positive | 3744455 - 3744973 | 19419.2 |
| 1-deoxyxylulose-5-phosphate synthase yajo | CI641_017990 | Not Available | Negative | 3745027 - 3746001 | 36422.2 |
| 1-deoxy-d-xylulose-5-phosphate synthase | CI641_017995 | Not Available | Negative | 3746181 - 3748043 | 67592.9 |
Pathways
1143 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





