Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| taurine abc transporter atp-binding subunit | CI641_017745 | Not Available | Positive | 3695396 - 3696163 | 28293.6 |
| taurine abc transporter permease tauc | CI641_017750 | Not Available | Positive | 3696160 - 3696987 | 29569.5 |
| taurine dioxygenase | CI641_017755 | Not Available | Positive | 3696984 - 3697835 | 32411.3 |
| porphobilinogen synthase | CI641_017760 | Not Available | Negative | 3697941 - 3698915 | 35626.8 |
| autotransporter outer membrane beta-barrel domain-containing protein | CI641_017765 | Not Available | Positive | 3699439 - 3702390 | 105837.0 |
| hydrogen peroxide resistance inhibitor ipra | CI641_017770 | Not Available | Positive | 3702478 - 3703101 | 23930.0 |
| d-alanyl-d-alanine- carboxypeptidase/endopeptidase amph | CI641_017775 | Not Available | Negative | 3703102 - 3704259 | 41851.5 |
| peptide antibiotic transporter sbma | CI641_017780 | Not Available | Positive | 3704611 - 3705831 | 46496.0 |
| surface-exposed outer membrane lipoprotein yaiw | CI641_017785 | Not Available | Positive | 3705844 - 3706938 | 40385.5 |
| duf2755 family protein | CI641_017790 | Not Available | Negative | 3706997 - 3707305 | 11425.2 |
Pathways
958 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





