Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CI641_017535 | Not Available | Positive | 3653195 - 3653440 | 8818.93 |
| hypothetical protein | CI641_017540 | Not Available | Negative | 3653457 - 3654128 | 24826.9 |
| duf1471 domain-containing protein | CI641_017545 | Not Available | Positive | 3654275 - 3654550 | 9929.94 |
| propionate catabolism operon regulatory protein prpr | CI641_017550 | Not Available | Negative | 3654648 - 3656234 | 58638.9 |
| methylisocitrate lyase | CI641_017555 | Not Available | Positive | 3656473 - 3657363 | 32135.5 |
| 2-methylcitrate synthase | CI641_017560 | Not Available | Positive | 3657710 - 3658879 | 43136.6 |
| 2-methylcitrate dehydratase | CI641_017565 | Not Available | Positive | 3658913 - 3660364 | 54000.7 |
| propionate--coa ligase | CI641_017570 | Not Available | Positive | 3660404 - 3662290 | 69409.8 |
| hypothetical protein | CI641_017575 | Not Available | Negative | 3662371 - 3662667 | 11150.4 |
| is110-like element is621 family transposase | CI641_017580 | Not Available | Positive | 3662659 - 3663639 | 36515.1 |
Pathways
854 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





