Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ankyrin repeat domain-containing protein | CI641_017490 | Not Available | Positive | 3643072 - 3643677 | 21688.3 |
| duf2877 domain-containing protein | CI641_017495 | Not Available | Positive | 3643717 - 3644580 | 32282.6 |
| acyl-coa synthetase fdra | CI641_017500 | Not Available | Positive | 3644570 - 3646117 | 55584.1 |
| duf1116 domain-containing protein | CI641_017505 | Not Available | Positive | 3646117 - 3647535 | 50451.1 |
| hypothetical protein | CI641_017510 | Not Available | Positive | 3647561 - 3647881 | 10748.2 |
| carbamate kinase family protein | CI641_017515 | Not Available | Positive | 3647957 - 3648907 | 33839.7 |
| amidohydrolase family protein | CI641_017520 | Not Available | Positive | 3648917 - 3650299 | 50536.6 |
| nadph-dependent aldehyde reductase yahk | CI641_017525 | Not Available | Positive | 3650676 - 3651725 | 37954.6 |
| hypothetical protein | CI641_017530 | Not Available | Positive | 3651968 - 3652783 | 31787.4 |
| Trna-pseudo | Not Available | Not Available | Positive | 3653125 - 3653205 | Not Available |
Pathways
839 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





