Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactate utilization protein c | CI641_017440 | Not Available | Positive | 3631550 - 3632245 | 25138.1 |
| hypothetical protein | CI641_017445 | Not Available | Negative | 3632488 - 3633156 | 25560.3 |
| choline dehydrogenase | CI641_017450 | Not Available | Negative | 3633369 - 3635039 | 61849.1 |
| betaine-aldehyde dehydrogenase | CI641_017455 | Not Available | Negative | 3635053 - 3636525 | 52981.3 |
| transcriptional regulator beti | CI641_017460 | Not Available | Negative | 3636539 - 3637126 | 21791.4 |
| choline bcct transporter bett | CI641_017465 | Not Available | Positive | 3637255 - 3639288 | 75846.5 |
| hypothetical protein | CI641_017470 | Not Available | Positive | 3639594 - 3639668 | 2654.67 |
| eal domain-containing protein | CI641_017475 | Not Available | Positive | 3640163 - 3641251 | 40741.3 |
| lysr family transcriptional regulator | CI641_017480 | Not Available | Negative | 3641293 - 3642225 | 34800.9 |
| duf1097 domain-containing protein | CI641_017485 | Not Available | Negative | 3642317 - 3642814 | 17296.0 |
Pathways
382 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





