Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein l,d-transpeptidase | CI641_016925 | Not Available | Negative | 3537618 - 3538358 | 28022.8 |
| type ii toxin-antitoxin system mrna interferase toxin yafq | CI641_016930 | Not Available | Negative | 3538514 - 3538792 | 10801.2 |
| type ii toxin-antitoxin system antitoxin dinj | CI641_016935 | Not Available | Negative | 3538795 - 3539055 | 9392.3 |
| nlpc/p60 family protein | CI641_016940 | Not Available | Positive | 3539241 - 3540014 | 29736.5 |
| type ii toxin-antitoxin system hicb family antitoxin | CI641_016945 | Not Available | Negative | 3540071 - 3540427 | 13400.8 |
| type ii toxin-antitoxin system hica family toxin | CI641_016950 | Not Available | Negative | 3540420 - 3540698 | 10187.3 |
| flagellar biosynthesis protein flha | CI641_016955 | Not Available | Negative | 3540803 - 3542896 | 75718.6 |
| flagellar type iii secretion system protein flhb | CI641_016960 | Not Available | Negative | 3542880 - 3544019 | 42722.6 |
| flagellar biosynthetic protein flir | CI641_016965 | Not Available | Negative | 3544009 - 3544791 | 28707.3 |
| flagellar type iii secretion system protein fliq | CI641_016970 | Not Available | Negative | 3544793 - 3545065 | 9698.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





