Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ile | Not Available | Not Available | Positive | 3483239 - 3483315 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 3483358 - 3483433 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 3483608 - 3486535 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 3486618 - 3486733 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 3486788 - 3486864 | Not Available |
| hypothetical protein | CI641_016695 | Not Available | Positive | 3489682 - 3489939 | 9435.12 |
| higa family addiction module antidote protein | CI641_016705 | Not Available | Negative | 3491092 - 3491367 | 10281.6 |
| type vi secretion system protein | CI641_016710 | Not Available | Negative | 3491367 - 3492413 | 38725.0 |
| type vi secretion system baseplate subunit tssg | CI641_016715 | Not Available | Negative | 3492424 - 3493419 | 37422.4 |
| type vi secretion system baseplate subunit tssf | CI641_016720 | Not Available | Negative | 3493416 - 3495299 | 70495.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





