Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (4s)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase | CI641_000400 | Not Available | Positive | 91891 - 92181 | 11269.4 |
| trans-aconitate 2-methyltransferase | CI641_000405 | Not Available | Positive | 92238 - 92996 | 28991.5 |
| hypothetical protein | CI641_000410 | Not Available | Negative | 93000 - 93914 | 34751.9 |
| tagaturonate reductase | CI641_000415 | Not Available | Negative | 94121 - 95572 | 54825.4 |
| diguanylate cyclase | CI641_000420 | Not Available | Negative | 95799 - 97217 | 52170.5 |
| duf4186 domain-containing protein | CI641_000425 | Not Available | Negative | 97356 - 97715 | 13558.6 |
| glutaminase b | CI641_000430 | Not Available | Negative | 97715 - 98641 | 33517.6 |
| succinate-semialdehyde dehydrogenase | CI641_000435 | Not Available | Negative | 98705 - 100093 | 49691.7 |
| lysr family transcriptional regulator | CI641_000440 | Not Available | Positive | 100194 - 101075 | 32462.8 |
| putative protein ynek | CI641_000445 | Not Available | Positive | 101153 - 102268 | 42910.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





