Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid-a-disaccharide synthase | CI641_016550 | Not Available | Positive | 3461254 - 3462402 | 42418.0 |
| ribonuclease hii | CI641_016555 | Not Available | Positive | 3462399 - 3462995 | 21527.3 |
| dna polymerase iii subunit alpha | CI641_016560 | Not Available | Positive | 3463032 - 3466514 | 129898.0 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | CI641_016565 | Not Available | Positive | 3466527 - 3467486 | 35289.6 |
| lysine decarboxylase ldcc | CI641_016570 | Not Available | Positive | 3467585 - 3469726 | 80594.9 |
| voc family protein | CI641_016575 | Not Available | Positive | 3469783 - 3470172 | 14707.4 |
| trna lysidine(34) synthetase tils | CI641_016580 | Not Available | Positive | 3470237 - 3471535 | 48128.0 |
| rho-binding antiterminator | CI641_016585 | Not Available | Negative | 3471584 - 3471844 | 9698.45 |
| yaep family protein | CI641_016590 | Not Available | Negative | 3471831 - 3472031 | 7214.59 |
| yaeq family protein | CI641_016595 | Not Available | Positive | 3472197 - 3472742 | 20920.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





