Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | CI641_016350 | Not Available | Negative | 3415041 - 3415625 | 20118.7 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | CI641_016355 | Not Available | Negative | 3415995 - 3416474 | 17951.6 |
| polynucleotide adenylyltransferase pcnb | CI641_016360 | Not Available | Negative | 3416471 - 3417889 | 54659.0 |
| trna glutamyl-q(34) synthetase gluqrs | CI641_016365 | Not Available | Negative | 3417928 - 3418854 | 34891.6 |
| rna polymerase-binding transcription factor dksa | CI641_016370 | Not Available | Negative | 3418891 - 3419346 | 17528.7 |
| dna/rna nuclease sfsa | CI641_016375 | Not Available | Negative | 3419524 - 3420228 | 26230.2 |
| rna 2',3'-cyclic phosphodiesterase | CI641_016380 | Not Available | Negative | 3420243 - 3420773 | 19935.0 |
| atp-dependent helicase hrpb | CI641_016385 | Not Available | Positive | 3420847 - 3423276 | 89051.0 |
| bifunctional glycosyl transferase/transpeptidase | CI641_016390 | Not Available | Positive | 3423472 - 3426006 | 94284.0 |
| ferrichrome porin fhua | CI641_016395 | Not Available | Positive | 3426226 - 3428469 | 82204.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





