Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate 1-decarboxylase | CI641_016300 | Not Available | Negative | 3405008 - 3405388 | 13834.5 |
| rpn family recombination-promoting nuclease/putative transposase | CI641_016305 | Not Available | Positive | 3405662 - 3406564 | 34694.9 |
| pantoate--beta-alanine ligase | CI641_016310 | Not Available | Negative | 3406638 - 3407489 | 31599.6 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | CI641_016315 | Not Available | Negative | 3407501 - 3408295 | 28181.0 |
| fimbrial-like adhesin | CI641_016320 | Not Available | Negative | 3408408 - 3409682 | 46411.3 |
| fimbrial protein staf | CI641_016325 | Not Available | Negative | 3409735 - 3410331 | 21409.7 |
| fimbrial-like protein yadl | CI641_016330 | Not Available | Negative | 3410358 - 3410960 | 20898.7 |
| fimbrial protein | CI641_016335 | Not Available | Negative | 3410975 - 3411544 | 20304.2 |
| outer membrane usher protein | CI641_016340 | Not Available | Negative | 3411561 - 3414161 | 95666.9 |
| fimbrial chaperone | CI641_016345 | Not Available | Negative | 3414196 - 3414936 | 26946.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





