Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-lactamase regulator ampe | CI641_016200 | Not Available | Positive | 3378226 - 3379080 | 32123.9 |
| aromatic amino acid transporter arop | CI641_016205 | Not Available | Negative | 3379123 - 3380493 | 49561.9 |
| pyruvate dehydrogenase complex transcriptional repressor pdhr | CI641_016210 | Not Available | Positive | 3381037 - 3381801 | 29427.2 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | CI641_016215 | Not Available | Positive | 3381962 - 3384625 | 99660.0 |
| pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | CI641_016220 | Not Available | Positive | 3384640 - 3386532 | 66099.8 |
| dihydrolipoyl dehydrogenase | CI641_016225 | Not Available | Positive | 3386857 - 3388281 | 50691.4 |
| duf3300 domain-containing protein | CI641_016230 | Not Available | Negative | 3388352 - 3390109 | 65622.2 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | CI641_016235 | Not Available | Positive | 3390464 - 3393061 | 93503.4 |
| upf0231 family protein | CI641_016240 | Not Available | Positive | 3393237 - 3393599 | 13942.3 |
| adenosylmethionine decarboxylase | CI641_016245 | Not Available | Negative | 3393637 - 3394431 | 30386.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





