Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system serine/threonine protein kinase toxin hipa | CI641_000350 | Not Available | Negative | 75761 - 77083 | 49324.7 |
| type ii toxin-antitoxin system antitoxin hipb | CI641_000355 | Not Available | Negative | 77083 - 77349 | 10047.9 |
| autotransporter barrel domain-containing lipoprotein | CI641_000360 | Not Available | Negative | 77558 - 82978 | 188702.0 |
| autoinducer-2 kinase | CI641_000365 | Not Available | Negative | 83509 - 85101 | 57532.0 |
| transcriptional regulator lsrr | CI641_000370 | Not Available | Negative | 85180 - 86133 | 33816.0 |
| autoinducer 2 abc transporter atp-binding protein lsra | CI641_000375 | Not Available | Positive | 86382 - 87917 | 55670.6 |
| autoinducer 2 abc transporter permease lsrc | CI641_000380 | Not Available | Positive | 87911 - 88939 | 36466.1 |
| autoinducer 2 abc transporter permease lsrd | CI641_000385 | Not Available | Positive | 88939 - 89931 | 34458.6 |
| autoinducer 2 abc transporter substrate-binding protein lsrb | CI641_000390 | Not Available | Positive | 89943 - 90965 | 36716.9 |
| 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | CI641_000395 | Not Available | Positive | 90992 - 91867 | 31878.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





