Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase ii | CI641_015950 | Not Available | Negative | 3322618 - 3324969 | 90044.7 |
| l-ribulose-5-phosphate 4-epimerase | CI641_015955 | Not Available | Negative | 3325044 - 3325739 | 25548.4 |
| l-arabinose isomerase | CI641_015960 | Not Available | Negative | 3325908 - 3327410 | 56132.2 |
| ribulokinase | CI641_015965 | Not Available | Negative | 3327421 - 3329121 | 61131.7 |
| arabinose operon transcriptional regulator arac | CI641_015970 | Not Available | Positive | 3329460 - 3330338 | 33385.8 |
| deda family protein | CI641_015975 | Not Available | Positive | 3330424 - 3331188 | 28213.8 |
| thiamine abc transporter atp-binding protein thiq | CI641_015980 | Not Available | Negative | 3331290 - 3331988 | 24983.6 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | CI641_015985 | Not Available | Negative | 3331972 - 3333582 | 59361.6 |
| thiamine abc transporter substrate binding subunit | CI641_015990 | Not Available | Negative | 3333558 - 3334541 | 36208.2 |
| hth-type transcriptional regulator sgrr | CI641_015995 | Not Available | Negative | 3334705 - 3336360 | 64007.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





