Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 3 dihydrofolate reductase | CI641_015900 | Not Available | Positive | 3310403 - 3310882 | 18000.3 |
| bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | CI641_015905 | Not Available | Negative | 3310960 - 3311802 | 31284.3 |
| co2+/mg2+ efflux protein apag | CI641_015910 | Not Available | Negative | 3311809 - 3312186 | 13867.6 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | CI641_015915 | Not Available | Negative | 3312189 - 3313010 | 30422.0 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | CI641_015920 | Not Available | Negative | 3313007 - 3313996 | 35193.0 |
| peptidylprolyl isomerase sura | CI641_015925 | Not Available | Negative | 3313996 - 3315282 | 47286.5 |
| lps assembly protein lptd | CI641_015930 | Not Available | Negative | 3315335 - 3317689 | 89675.8 |
| co-chaperone djla | CI641_015935 | Not Available | Positive | 3317944 - 3318759 | 30567.2 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | CI641_015940 | Not Available | Negative | 3318876 - 3319535 | 24862.1 |
| rna polymerase-associated protein rapa | CI641_015945 | Not Available | Negative | 3319547 - 3322453 | 109775.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





