Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component | CI641_015380 | Not Available | Negative | 3198735 - 3200297 | 58868.0 |
| 4-hydroxyphenylacetate catabolism regulatory protein hpaa | CI641_015385 | Not Available | Negative | 3200548 - 3201438 | 34332.0 |
| 4-hydroxyphenylacetate permease | CI641_015390 | Not Available | Negative | 3201448 - 3202824 | 50601.6 |
| 4-hydroxy-2-oxoheptanedioate aldolase | CI641_015395 | Not Available | Negative | 3202999 - 3203787 | 28074.8 |
| 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | CI641_015400 | Not Available | Negative | 3203798 - 3204601 | 29716.5 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | CI641_015405 | Not Available | Negative | 3204712 - 3205092 | 14295.3 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | CI641_015410 | Not Available | Negative | 3205102 - 3205953 | 32020.2 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | CI641_015415 | Not Available | Negative | 3205955 - 3207421 | 53030.7 |
| 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase | CI641_015420 | Not Available | Negative | 3207418 - 3208707 | 47126.0 |
| homoprotocatechuate degradation operon regulator hpar | CI641_015425 | Not Available | Positive | 3208979 - 3209425 | 17211.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





