Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i restriction endonuclease subunit r | CI641_015330 | Not Available | Negative | 3186056 - 3189319 | 124911.0 |
| restriction endonuclease subunit s | CI641_015335 | Not Available | Negative | 3189414 - 3190796 | 51779.3 |
| type i restriction-modification system subunit m | CI641_015340 | Not Available | Negative | 3190786 - 3192405 | 60592.9 |
| restriction endonuclease | CI641_015345 | Not Available | Negative | 3192469 - 3193635 | 44317.1 |
| brnt family toxin | CI641_015350 | Not Available | Positive | 3193832 - 3194119 | 11210.3 |
| brna antitoxin family protein | CI641_015355 | Not Available | Positive | 3194106 - 3194408 | 11534.7 |
| gtpase | CI641_015360 | Not Available | Negative | 3194442 - 3195398 | 35680.8 |
| ybdd/yjix family protein | CI641_015365 | Not Available | Negative | 3195409 - 3195612 | 7729.24 |
| pyruvate/proton symporter btst | CI641_015370 | Not Available | Negative | 3195662 - 3197812 | 77314.5 |
| 4-hydroxyphenylacetate 3-monooxygenase reductase subunit | CI641_015375 | Not Available | Negative | 3198205 - 3198717 | 18540.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





