Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CI641_014800 | Not Available | Positive | 3083210 - 3083440 | 9336.44 |
| ornithine carbamoyltransferase | CI641_014805 | Not Available | Negative | 3083541 - 3084545 | 36865.1 |
| ribonuclease e inhibitor rrab | CI641_014810 | Not Available | Positive | 3084707 - 3085123 | 15603.5 |
| gnat family n-acetyltransferase | CI641_014815 | Not Available | Negative | 3085169 - 3085672 | 18609.4 |
| duf898 domain-containing protein | CI641_014820 | Not Available | Positive | 3085865 - 3087061 | 44901.2 |
| valine--trna ligase | CI641_014825 | Not Available | Negative | 3087117 - 3089972 | 108198.0 |
| dna polymerase iii subunit chi | CI641_014830 | Not Available | Negative | 3089972 - 3090454 | 18119.3 |
| leucyl aminopeptidase | CI641_014835 | Not Available | Negative | 3090549 - 3092060 | 54883.1 |
| lps export abc transporter permease lptf | CI641_014840 | Not Available | Positive | 3092327 - 3093427 | 40360.1 |
| lps export abc transporter permease lptg | CI641_014845 | Not Available | Positive | 3093427 - 3094509 | 39621.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





